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Moloc: Molecular Modelling on UNIX Workstations: 13 Pharmacophor Building [php]

Pharmacophor Building [php]

This is the basic facility to build and modify pharmacophors. These are built up of single agons (features) which are represented by a point in space with several properties, first of all a radius characterizing the extension. They are displayed as wire-frame spheres of the corresponding radius. The agon type is evident from the color of the sphere. There are directed agons (H-bond donors and acceptors). Their directionality is shown by a spot of different color on the sphere. The extension of the spot characterizes the angular range over which the directional property is taken to be active.

13.1 Add and Delete Agons

This menu provides various modes of adding agons to pharmacophors.

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